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  1. CommunityJul 23, 2020

    Uses genomic similarity to a reference database of phages with known hosts to predict hosts for uncharacterized phages

    Uses genomic similarity to a reference database of phages with known hosts to predict hosts for uncharacterized phages

    CommunityPhage host prediction
  2. CommunityJul 23, 2020

    A human viral protein database for diversity and functional annotation

    A human viral protein database for diversity and functional annotation

    CommunityVirus-specific Databases
  3. CommunityJul 23, 2020

    Kernelized Logistic Matrix Factorization based on Similarity Network Fusion for predicting virus–host association

    Kernelized Logistic Matrix Factorization based on Similarity Network Fusion for predicting virus–host association

    CommunityPhage host prediction
  4. CommunityJul 23, 2020

    An integrated reference database of both cultured and uncultured DNA/RNA viruses

    An integrated reference database of both cultured and uncultured DNA/RNA viruses

    CommunityVirus-specific Databases
  5. CommunityJul 23, 2020

    Useful for concentrating virus particles from large-volume samples

    Useful for concentrating virus particles from large-volume samples

    CommunitySample Processing
  6. CommunityJul 23, 2020

    KBase

    Community
  7. CommunityJul 23, 2020

    The gold standard database for understanding functions of the different biological systems from large-scale molecular dataset

    The gold standard database for understanding functions of the different biological systems from large-scale molecular datasets

    CommunityFunctional annotation database
  8. CommunityJul 23, 2020

    Large scale phage purification

    Large scale phage purification

    CommunityPhage Purificaiton
  9. CommunityJul 23, 2020

    Uses a hydrolysed macroporous epoxy-based polymer system to concentrate and purify waterborne viruses

    Uses a hydrolysed macroporous epoxy-based polymer system to concentrate and purify waterborne viruses

    CommunitySample Processing
  10. CommunityJul 23, 2020

    Another fully automated extraction system that allows simultaneous extraction of 96 specimens using magnetic bead technology

    Another fully automated extraction system that allows simultaneous extraction of 96 specimens using magnetic bead technology

    CommunitySample Processing
  11. CommunityJul 23, 2020

    A tool that uses machine learning for prediction of dsDNA phages in metagenomes; Machine learning tool for predicting phage

    A tool that uses machine learning for prediction of dsDNA phages in metagenomes; Machine learning tool for predicting phage sequences in metagenomic bins.

    CommunityViral Recovery
  12. CommunityJul 23, 2020

    Integrates BLAST hits to multiple phage genomes in a database to identify phage sequences in assembled contigs.

    Integrates BLAST hits to multiple phage genomes in a database to identify phage sequences in assembled contigs.

    Community
  13. CommunityJul 23, 2020

    Identifies viral sequences by leveraging metagenomic assembly graphs and analyzing the variations in depth of coverage betwee

    Identifies viral sequences by leveraging metagenomic assembly graphs and analyzing the variations in depth of coverage between viral and bacterial genomes. Made of three modules, it also calculates the completeness of predicted viral sequen

    Community
  14. CommunityJul 23, 2020

    A microbe–phage interaction database with over 30 k viral clusters, gathered from public databases and microbiome sequences

    A microbe–phage interaction database with over 30 k viral clusters, gathered from public databases and microbiome sequences

    CommunityVirus-specific Databases
  15. CommunityJul 23, 2020

    A database of manually curated protein families, containing 14 831 Pfam-A families

    A database of manually curated protein families, containing 14 831 Pfam-A families

    CommunityFunctional annotation database
  16. CommunityJul 23, 2020

    Phage multiplication for stock preparation

    Phage multiplication for stock preparation

    CommunityMultiplicationPhage Stock
  17. CommunityJul 23, 2020

    PhageAI

    Community
  18. CommunityJul 23, 2020

    The Actinobacteriophage Database

    The Actinobacteriophage Database SEA-PHAGES

    Community
  19. CommunityJul 23, 2020

    Phamerator

    SEA-PHAGES

    Community
  20. CommunityJul 23, 2020

    Identifies phage sequences by a machine learning model based on k-mer frequencies.

    Identifies phage sequences by a machine learning model based on k-mer frequencies.

    Community
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