Seeker identifies phage sequences without genome alignment
Seeker is an LSTM-based Python tool that distinguishes phage from bacterial DNA without reference-genome alignment. The repository includes command-line FASTA classification, a Python library and trained models. Its documentation specifies an older Python 3.6/3.7 environment and cautions that the experimental prophage model was not thoroughly tested, so this is a historical tool resource rather than a new release.
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| Source | Seeker authors |
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