InstaDeep NTv3 (Nucleotide Transformer v3): open genome foundation model family and notebooks

InstaDeep's Nucleotide Transformer v3 is a multi-species genome foundation model that predicts functional tracks, annotates genomes and designs regulatory sequences, reasoning over one million nucleotides at single-base resolution. InstaDeep states the full model family is released with pre-trained and post-trained checkpoints and PyTorch notebooks (inference, functional tracks, annotation, variant analysis, enhancer design). AI-for-science item, not phage-specific.